Genome Assembly Workflows
This page documents genome assembly workflows and functions in Mycelia.
Assembly Execution
Main genome assembly functions supporting multiple assemblers.
Functions
- Multi-assembler support
- Parameter optimization
- Assembly pipeline management
HiFi Assembly
Specialized workflows for PacBio HiFi long reads.
Functions
- HiFi-specific assembly
- High-accuracy read processing
- Circular sequence detection
Related Documentation
- See Tutorial 4: Genome Assembly for practical examples
- See Assembly Method Selection for choosing the right assembler
- See API Reference for detailed function documentation